Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs72776072 chr2:6626623 C/T 3.41E-5 526 38.97 44.67 10.97 KM Plot
KIRC rs72834617 chr6:25999175 G/A 7.65E-9 519 41 37.03 3.37 KM Plot
KIRC rs72834623 chr6:26014852 G/A 3.03E-9 519 41.27 36.95 3.37 KM Plot
KIRC rs72834677 chr6:26106604 C/A 7.02E-9 513 41.73 36.95 3.37 KM Plot
KIRC rs72839796 chr5:170280847 C/G 1.67E-9 522 39.38 38.1 2.43 KM Plot
KIRC rs7295387 chr12:29526608 C/A 5.92E-8 524 40.57 39.47 6.07 KM Plot
KIRC rs73029736 chr2:168086785 G/A 4.16E-8 525 40 32.42 3.37 KM Plot
KIRC rs7303141 chr12:85196340 A/G 3.57E-6 527 39.17 41 3.37 KM Plot
KIRC rs73062531 chr19:56163704 C/T 1.56E-6 517 41.87 37.6 7.4 KM Plot
KIRC rs7308372 chr12:29522398 C/G 5.92E-8 524 40.57 39.47 6.07 KM Plot
KIRC rs73102536 chr1:220480809 A/T 6.04E-5 522 41.27 32.05 11.47 KM Plot
KIRC rs7314594 chr12:29430894 G/T 4.98E-8 526 40.6 39.47 6.07 KM Plot
KIRC rs73164693 chr22:25794557 G/A 0 514 39.7 42.33 0.73 KM Plot
KIRC rs73209363 chr21:21233007 C/T 2.7E-5 520 40.57 31.38 5.6 KM Plot
KIRC rs73234606 chr4:16145380 T/C 1.43E-9 521 39.62 41.27 6.07 KM Plot